Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAF3IP1Q8TDR0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 CNN2P10-201ENST00000443067 918 ntBASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 C2orf69P2-201ENST00000562032 1123 ntBASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAF3IP1Q8TDR0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AC010141.1-201ENST00000411585 623 ntBASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AL161932.2-201ENST00000435436 679 ntBASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 CHMP1AP1-201ENST00000445563 662 ntBASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 HIST2H2BB-201ENST00000449108 381 ntBASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 CTBP2P5-201ENST00000454986 1264 ntBASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 CICP4-201ENST00000447359 2812 ntBASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAF3IP1Q8TDR0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAF3IP1Q8TDR0 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms