Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
CFAP61Q8NHU2 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CFAP61Q8NHU2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CFAP61Q8NHU2 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CFAP61Q8NHU2 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 AC007551.1-201ENST00000457394 519 ntBASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 KRT17P8-201ENST00000540749 863 ntBASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 AL138709.1-201ENST00000614840 1693 ntBASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 AC068760.1-201ENST00000493579 1953 ntBASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CFAP61Q8NHU2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 PCDHA5-203ENST00000614258 4248 ntBASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 AL590640.2-201ENST00000457038 527 ntBASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 AC025279.2-201ENST00000569730 653 ntBASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 GNRHR2-203ENST00000581100 1187 ntBASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 ECM1P1-201ENST00000604092 1279 ntBASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 ENPP7P14-201ENST00000621765 1040 ntBASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CFAP61Q8NHU2 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms