Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 SNORA50D-201ENST00000408059 134 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 RPSAP61-201ENST00000412542 878 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 ASLP1-201ENST00000428790 637 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 RN7SL22P-201ENST00000471800 269 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 AACSP1-202ENST00000521412 1095 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 DDX11L8-201ENST00000535849 366 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 AC091951.1-201ENST00000512854 2465 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 AC018529.2-202ENST00000611482 3087 ntBASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.36■□□□□ 0.53
COL22A1Q8NFW1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 MKL1-204ENST00000402630 747 ntTSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 AL627095.1-201ENST00000414775 321 ntBASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 AC022121.1-201ENST00000484584 579 ntBASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 RN7SL638P-201ENST00000494527 290 ntBASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 FTH1-205ENST00000529631 507 ntTSL 4 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 TUBA3GP-201ENST00000410028 1325 ntBASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COL22A1Q8NFW1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 MARCKSL1P2-201ENST00000401037 976 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 SERPINB8P1-201ENST00000401898 377 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 HNRNPA1P72-201ENST00000529511 967 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AC092535.4-201ENST00000609548 397 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AC015912.3-201ENST00000619432 348 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AC013268.4-201ENST00000637413 2228 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 TUBB8P9-201ENST00000422534 1276 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 TUBB8P10-201ENST00000430210 1279 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 MIR4309-201ENST00000582498 83 ntBASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 MDC1-209ENST00000613547 830 ntTSL 5 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COL22A1Q8NFW1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL22A1Q8NFW1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
COL22A1Q8NFW1 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms