Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 AC136759.1-202ENST00000530858 2194 ntBASIC13.81□□□□□ -0.2
SRFBP1Q8NEF9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 BRWD1P1-201ENST00000401091 371 ntBASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 KLF2P1-201ENST00000447438 1042 ntBASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AL591846.1-201ENST00000451736 433 ntBASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AC006122.1-201ENST00000493323 440 ntBASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 RN7SL163P-201ENST00000583100 276 ntBASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 AL008721.1-201ENST00000609964 604 ntBASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SRFBP1Q8NEF9 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AC106794.1-201ENST00000506935 792 ntBASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AC008805.1-201ENST00000590892 364 ntBASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 BNIP3P13-201ENST00000599968 566 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms