Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AC098614.1-201ENST00000368528 745 ntBASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AL355864.2-201ENST00000447420 863 ntBASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AL035414.1-201ENST00000451327 857 ntBASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AP003171.2-201ENST00000528208 925 ntBASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AC025279.2-201ENST00000569730 653 ntBASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AC027307.3-201ENST00000594262 1100 ntBASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 AC244669.2-201ENST00000612320 853 ntBASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLDN22Q8N7P3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AC092933.1-201ENST00000393644 945 ntBASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AC007389.4-201ENST00000454674 793 ntBASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 SLC25A47P1-201ENST00000531577 414 ntBASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AL596325.1-201ENST00000563991 1082 ntBASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 AC008825.2-201ENST00000603374 718 ntBASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 IGHV3-72-202ENST00000621503 303 ntBASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLDN22Q8N7P3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CLDN22Q8N7P3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms