Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 OR52M2P-201ENST00000414298 959 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 COQ10BP2-201ENST00000513804 724 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 AC023794.5-201ENST00000564380 2157 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 SNORD3B-1-201ENST00000577988 758 ntBASIC22.06■■□□□ 1.12
VPS8Q8N3P4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC22.06■■□□□ 1.12
VPS8Q8N3P4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 LINC02486-201ENST00000604157 3000 ntBASIC22.05■■□□□ 1.12
VPS8Q8N3P4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 DPY19L2P5-201ENST00000456300 331 ntBASIC22.05■■□□□ 1.12
VPS8Q8N3P4 AC104784.1-201ENST00000473096 294 ntBASIC22.05■■□□□ 1.12
VPS8Q8N3P4 HERC2P11-201ENST00000562845 725 ntBASIC22.05■■□□□ 1.12
VPS8Q8N3P4 AC100756.2-201ENST00000569537 736 ntBASIC22.05■■□□□ 1.12
VPS8Q8N3P4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 MIR6858-201ENST00000620733 67 ntBASIC22.05■■□□□ 1.12
VPS8Q8N3P4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
VPS8Q8N3P4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 MSANTD2P1-201ENST00000445341 1368 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 AC090502.4-201ENST00000551714 1386 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 STK24P1-201ENST00000455035 1291 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 RN7SL357P-201ENST00000581065 298 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 KRT18P8-201ENST00000581937 1246 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 RN7SL736P-201ENST00000613111 269 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 AC105137.3-201ENST00000617588 984 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 AC089987.1-201ENST00000551654 2209 ntBASIC22.04■■□□□ 1.12
VPS8Q8N3P4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
VPS8Q8N3P4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
VPS8Q8N3P4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms