Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 MYADML-201ENST00000474610 2147 ntBASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.83□□□□□ -0.04
NPAS3Q8IXF0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AL161772.1-201ENST00000610494 4412 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 FAM45BP-202ENST00000592932 1624 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AJ011931.1-201ENST00000618749 2492 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 RNA5SP406-201ENST00000516106 112 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AC226150.1-201ENST00000544259 466 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AC073592.2-201ENST00000623062 780 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AC011471.3-201ENST00000623576 402 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 LINC00244-201ENST00000625073 613 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AC025183.3-201ENST00000623526 1482 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 AC021305.1-201ENST00000520656 1514 ntBASIC14.82□□□□□ -0.04
NPAS3Q8IXF0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 CCT8L1P-201ENST00000465400 1674 ntBASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 PPP1R2P4-201ENST00000424051 595 ntBASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 RN7SL564P-201ENST00000496309 250 ntBASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AL354702.1-201ENST00000442006 1960 ntBASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NPAS3Q8IXF0 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms