Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 FAM58BP-201ENST00000439056 645 ntBASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 ST13P19-201ENST00000442505 1124 ntBASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 AC100827.2-201ENST00000563214 1194 ntBASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 AC244157.2-201ENST00000616239 1006 ntBASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL3Q8IVW4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 AC012441.2-201ENST00000444843 739 ntBASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 RAB43P1-201ENST00000561790 589 ntBASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 AL512343.1-201ENST00000605837 169 ntBASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL3Q8IVW4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.81□□□□□ -0.04
CDKL3Q8IVW4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms