Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 AC093433.1-201ENST00000458048 571 ntBASIC12.92□□□□□ -0.34
LRRC28Q86X40 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 NCLP1-201ENST00000445357 1963 ntBASIC12.92□□□□□ -0.34
LRRC28Q86X40 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.92□□□□□ -0.34
LRRC28Q86X40 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LRRC28Q86X40 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 BAATP1-201ENST00000412284 1225 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 TMEM14DP-201ENST00000422205 345 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 USP32P1-208ENST00000506594 1164 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 AP001582.1-201ENST00000525856 295 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 RAB43P1-201ENST00000561790 589 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AC233724.13-201ENST00000598383 410 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 BX539320.1-201ENST00000623759 877 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 AP002761.4-201ENST00000565433 3361 ntBASIC12.91□□□□□ -0.34
LRRC28Q86X40 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
LRRC28Q86X40 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
LRRC28Q86X40 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms