Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 RN7SL69P-201ENST00000468423 272 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 RN7SL838P-201ENST00000481676 295 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AC100858.1-201ENST00000514059 1228 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 NAT9-219ENST00000582524 573 ntTSL 4 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AP001462.1-201ENST00000594089 452 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AC005746.3-201ENST00000614751 393 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 KRT8P28-201ENST00000433288 1390 ntBASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RSPO4Q2I0M5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 BAK1P2-201ENST00000532665 631 ntBASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 MST1L-204ENST00000545160 559 ntTSL 4 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RSPO4Q2I0M5 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms