Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CD47Q08722 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.46□□□□□ -0.25
CD47Q08722 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CD47Q08722 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CD47Q08722 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CD47Q08722 LRRC59-203ENST00000576448 1531 ntBASIC13.46□□□□□ -0.25
CD47Q08722 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CD47Q08722 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.46□□□□□ -0.25
CD47Q08722 AC002472.2-201ENST00000442739 958 ntBASIC13.46□□□□□ -0.25
CD47Q08722 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CD47Q08722 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CD47Q08722 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CD47Q08722 RN7SL204P-201ENST00000582831 262 ntBASIC13.46□□□□□ -0.25
CD47Q08722 TMEM261P1-201ENST00000604899 340 ntBASIC13.46□□□□□ -0.25
CD47Q08722 AC008494.3-201ENST00000606615 944 ntBASIC13.46□□□□□ -0.25
CD47Q08722 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
CD47Q08722 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CD47Q08722 CES1P1-201ENST00000421606 1704 ntBASIC13.46□□□□□ -0.25
CD47Q08722 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC13.46□□□□□ -0.26
CD47Q08722 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
CD47Q08722 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.46□□□□□ -0.26
CD47Q08722 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CD47Q08722 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.46□□□□□ -0.26
CD47Q08722 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.46□□□□□ -0.26
CD47Q08722 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.45□□□□□ -0.26
CD47Q08722 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 MIR661-201ENST00000384842 89 ntBASIC13.45□□□□□ -0.26
CD47Q08722 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.45□□□□□ -0.26
CD47Q08722 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 TERF1P3-201ENST00000505638 1227 ntBASIC13.45□□□□□ -0.26
CD47Q08722 AC022616.1-201ENST00000518688 554 ntBASIC13.45□□□□□ -0.26
CD47Q08722 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CD47Q08722 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.45□□□□□ -0.26
CD47Q08722 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 DUX4L47-201ENST00000566374 394 ntBASIC13.45□□□□□ -0.26
CD47Q08722 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 AC140912.1-201ENST00000577171 1054 ntBASIC13.45□□□□□ -0.26
CD47Q08722 MIR4745-201ENST00000577608 62 ntBASIC13.45□□□□□ -0.26
CD47Q08722 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.45□□□□□ -0.26
CD47Q08722 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.45□□□□□ -0.26
CD47Q08722 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.45□□□□□ -0.26
CD47Q08722 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
CD47Q08722 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.45□□□□□ -0.26
CD47Q08722 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.45□□□□□ -0.26
CD47Q08722 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD47Q08722 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms