Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.13■□□□□ 0.01
IRX4P78413 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
IRX4P78413 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.13■□□□□ 0.01
IRX4P78413 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.13■□□□□ 0.01
IRX4P78413 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
IRX4P78413 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 FAM8A4P-201ENST00000435433 1213 ntBASIC15.13■□□□□ 0.01
IRX4P78413 FTLP1-201ENST00000449155 526 ntBASIC15.13■□□□□ 0.01
IRX4P78413 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
IRX4P78413 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
IRX4P78413 FGFR3P5-201ENST00000564496 886 ntBASIC15.13■□□□□ 0.01
IRX4P78413 RN7SL774P-201ENST00000577467 290 ntBASIC15.13■□□□□ 0.01
IRX4P78413 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 MIR3907-201ENST00000579424 151 ntBASIC15.13■□□□□ 0.01
IRX4P78413 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
IRX4P78413 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.13■□□□□ 0.01
IRX4P78413 AL353726.2-201ENST00000623259 884 ntBASIC15.13■□□□□ 0.01
IRX4P78413 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
IRX4P78413 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
IRX4P78413 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IRX4P78413 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
IRX4P78413 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.13■□□□□ 0.01
IRX4P78413 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 LRRC59-203ENST00000576448 1531 ntBASIC15.12■□□□□ 0.01
IRX4P78413 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.12■□□□□ 0.01
IRX4P78413 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.12■□□□□ 0.01
IRX4P78413 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.12■□□□□ 0.01
IRX4P78413 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.12■□□□□ 0.01
IRX4P78413 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.12■□□□□ 0.01
IRX4P78413 RN7SL11P-201ENST00000471305 293 ntBASIC15.12■□□□□ 0.01
IRX4P78413 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.12■□□□□ 0.01
IRX4P78413 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.12■□□□□ 0.01
IRX4P78413 ENPP7P14-201ENST00000621765 1040 ntBASIC15.12■□□□□ 0.01
IRX4P78413 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
IRX4P78413 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.12■□□□□ 0.01
IRX4P78413 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.12■□□□□ 0.01
IRX4P78413 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.12■□□□□ 0.01
IRX4P78413 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.12■□□□□ 0.01
IRX4P78413 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IRX4P78413 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC15.11■□□□□ 0.01
IRX4P78413 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
IRX4P78413 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.11■□□□□ 0.01
IRX4P78413 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms