Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
RPL39P62891 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC10.24□□□□□ -0.77
RPL39P62891 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 AC073869.1-201ENST00000415574 2762 ntBASIC10.24□□□□□ -0.77
RPL39P62891 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
RPL39P62891 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.24□□□□□ -0.77
RPL39P62891 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.24□□□□□ -0.77
RPL39P62891 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.24□□□□□ -0.77
RPL39P62891 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.24□□□□□ -0.77
RPL39P62891 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.24□□□□□ -0.77
RPL39P62891 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC10.24□□□□□ -0.77
RPL39P62891 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 RPL13AP25-201ENST00000484130 612 ntBASIC10.24□□□□□ -0.77
RPL39P62891 GIMAP3P-201ENST00000495150 836 ntBASIC10.24□□□□□ -0.77
RPL39P62891 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.24□□□□□ -0.77
RPL39P62891 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.24□□□□□ -0.77
RPL39P62891 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.24□□□□□ -0.77
RPL39P62891 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC10.24□□□□□ -0.77
RPL39P62891 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 AC004466.1-201ENST00000599515 1080 ntBASIC10.24□□□□□ -0.77
RPL39P62891 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 AC007431.3-201ENST00000623221 587 ntBASIC10.24□□□□□ -0.77
RPL39P62891 Z92544.3-201ENST00000624747 417 ntBASIC10.24□□□□□ -0.77
RPL39P62891 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 AL122018.1-201ENST00000446607 2310 ntBASIC10.24□□□□□ -0.77
RPL39P62891 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.24□□□□□ -0.77
RPL39P62891 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 AL805961.2-201ENST00000642139 4817 ntBASIC10.24□□□□□ -0.77
RPL39P62891 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC10.24□□□□□ -0.77
RPL39P62891 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC10.24□□□□□ -0.77
RPL39P62891 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.24□□□□□ -0.77
RPL39P62891 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
RPL39P62891 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
RPL39P62891 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.23□□□□□ -0.77
RPL39P62891 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
RPL39P62891 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.23□□□□□ -0.77
RPL39P62891 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.23□□□□□ -0.77
RPL39P62891 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
RPL39P62891 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 NME1-209ENST00000511355 1645 ntTSL 5 BASIC10.23□□□□□ -0.77
RPL39P62891 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC10.23□□□□□ -0.77
RPL39P62891 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC10.23□□□□□ -0.77
RPL39P62891 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 APOA1-205ENST00000375329 927 ntTSL 2 BASIC10.23□□□□□ -0.77
RPL39P62891 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 KLF2P2-201ENST00000416807 1039 ntBASIC10.23□□□□□ -0.77
RPL39P62891 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC10.23□□□□□ -0.77
RPL39P62891 CNN2P2-201ENST00000443536 909 ntBASIC10.23□□□□□ -0.77
RPL39P62891 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
RPL39P62891 CNN2P3-201ENST00000450201 906 ntBASIC10.23□□□□□ -0.77
RPL39P62891 FO681548.1-201ENST00000455617 1132 ntBASIC10.23□□□□□ -0.77
RPL39P62891 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.23□□□□□ -0.77
RPL39P62891 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 176.8 ms