Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 KRT90P-201ENST00000549264 1064 ntBASIC13.65□□□□□ -0.22
RPS3AP61247 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPS3AP61247 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPS3AP61247 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.65□□□□□ -0.22
RPS3AP61247 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.65□□□□□ -0.22
RPS3AP61247 MIR6752-201ENST00000618442 71 ntBASIC13.65□□□□□ -0.22
RPS3AP61247 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.65□□□□□ -0.22
RPS3AP61247 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.65□□□□□ -0.22
RPS3AP61247 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPS3AP61247 AL031595.1-201ENST00000623969 4709 ntBASIC13.65□□□□□ -0.22
RPS3AP61247 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
RPS3AP61247 AL360270.3-201ENST00000609118 1348 ntBASIC13.64□□□□□ -0.23
RPS3AP61247 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RPS3AP61247 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RPS3AP61247 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.64□□□□□ -0.23
RPS3AP61247 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.64□□□□□ -0.23
RPS3AP61247 AP000812.2-201ENST00000538934 718 ntBASIC13.64□□□□□ -0.23
RPS3AP61247 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.64□□□□□ -0.23
RPS3AP61247 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.64□□□□□ -0.23
RPS3AP61247 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RPS3AP61247 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.64□□□□□ -0.23
RPS3AP61247 COX11-210ENST00000639671 696 ntBASIC13.64□□□□□ -0.23
RPS3AP61247 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPS3AP61247 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.64□□□□□ -0.23
RPS3AP61247 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RPS3AP61247 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms