Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN12P56749 MIR193BHG-211ENST00000641433 5365 ntBASIC12.61□□□□□ -0.39
CLDN12P56749 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN12P56749 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN12P56749 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN12P56749 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN12P56749 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN12P56749 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CLDN12P56749 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN12P56749 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CLDN12P56749 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CLDN12P56749 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.61□□□□□ -0.39
CLDN12P56749 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.61□□□□□ -0.39
CLDN12P56749 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CLDN12P56749 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CLDN12P56749 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN12P56749 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN12P56749 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
CLDN12P56749 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.6□□□□□ -0.39
CLDN12P56749 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.6□□□□□ -0.39
CLDN12P56749 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CLDN12P56749 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.6□□□□□ -0.39
CLDN12P56749 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.6□□□□□ -0.39
CLDN12P56749 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CLDN12P56749 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLDN12P56749 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CLDN12P56749 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CLDN12P56749 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.59□□□□□ -0.39
CLDN12P56749 DNAJB3-202ENST00000449667 1266 ntBASIC12.59□□□□□ -0.39
CLDN12P56749 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.59□□□□□ -0.39
CLDN12P56749 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.59□□□□□ -0.39
CLDN12P56749 DOC2GP-202ENST00000514950 1163 ntBASIC12.59□□□□□ -0.39
CLDN12P56749 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CLDN12P56749 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC12.59□□□□□ -0.39
CLDN12P56749 AC015911.4-201ENST00000588022 1070 ntBASIC12.59□□□□□ -0.39
CLDN12P56749 AL390754.1-201ENST00000619088 582 ntBASIC12.59□□□□□ -0.39
CLDN12P56749 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
CLDN12P56749 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CLDN12P56749 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CLDN12P56749 AL590440.2-201ENST00000641973 1595 ntBASIC12.59□□□□□ -0.39
CLDN12P56749 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms