Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.8□□□□□ -0.2
CLDN6P56747 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN6P56747 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.79□□□□□ -0.2
CLDN6P56747 BCAS2P2-201ENST00000425064 674 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 FAM86B3P-203ENST00000523992 854 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A21P-201ENST00000510875 1396 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A15P-201ENST00000514465 1395 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A6P-201ENST00000515148 1394 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A16P-201ENST00000526662 1395 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A9P-201ENST00000527940 1395 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A5P-201ENST00000528738 1395 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A14P-201ENST00000530386 1395 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 FAM90A13P-201ENST00000534703 1395 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 AC025183.3-201ENST00000623526 1482 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 AC126365.1-201ENST00000578585 1514 ntBASIC13.79□□□□□ -0.2
CLDN6P56747 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.79□□□□□ -0.2
CLDN6P56747 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
CLDN6P56747 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CLDN6P56747 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 LINC00528-201ENST00000600723 2160 ntBASIC13.78□□□□□ -0.2
CLDN6P56747 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CLDN6P56747 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 TCAF2P1-201ENST00000291129 2421 ntBASIC13.78□□□□□ -0.2
CLDN6P56747 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN6P56747 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN6P56747 AC012158.2-201ENST00000536546 354 ntBASIC13.78□□□□□ -0.2
CLDN6P56747 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN6P56747 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN6P56747 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN6P56747 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms