Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMGA2P52926 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HMGA2P52926 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.14□□□□□ -0.31
HMGA2P52926 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HMGA2P52926 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HMGA2P52926 AC103592.1-201ENST00000394513 664 ntBASIC13.14□□□□□ -0.31
HMGA2P52926 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.14□□□□□ -0.31
HMGA2P52926 AC106760.1-201ENST00000508690 800 ntBASIC13.14□□□□□ -0.31
HMGA2P52926 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.14□□□□□ -0.31
HMGA2P52926 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.14□□□□□ -0.31
HMGA2P52926 AC073413.1-201ENST00000603927 732 ntBASIC13.14□□□□□ -0.31
HMGA2P52926 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.14□□□□□ -0.31
HMGA2P52926 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HMGA2P52926 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC13.14□□□□□ -0.31
HMGA2P52926 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
HMGA2P52926 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HMGA2P52926 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HMGA2P52926 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 CCT8L1P-201ENST00000465400 1674 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 AC005229.1-201ENST00000392885 409 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 SNORA50C-201ENST00000408535 133 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 TSPY16P-201ENST00000449843 468 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.13□□□□□ -0.31
HMGA2P52926 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.13□□□□□ -0.31
HMGA2P52926 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 AC140912.1-201ENST00000577171 1054 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 AJ011932.1-201ENST00000621707 465 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 AC090386.2-201ENST00000623010 1039 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 SNORA50.1-201ENST00000628590 135 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 AC006453.4-201ENST00000636949 1252 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
HMGA2P52926 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC13.13□□□□□ -0.31
HMGA2P52926 SHC1P1-201ENST00000425230 1745 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 AC108024.1-201ENST00000626286 1721 ntBASIC13.13□□□□□ -0.31
HMGA2P52926 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HMGA2P52926 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.13□□□□□ -0.31
HMGA2P52926 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
HMGA2P52926 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGA2P52926 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.12□□□□□ -0.31
HMGA2P52926 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.12□□□□□ -0.31
HMGA2P52926 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGA2P52926 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HMGA2P52926 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms