Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 AC020658.6-201ENST00000623564 1870 ntBASIC13.64□□□□□ -0.23
KNTC1P50748 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KNTC1P50748 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 AC092135.3-201ENST00000624151 1846 ntBASIC13.64□□□□□ -0.23
KNTC1P50748 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
KNTC1P50748 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 HNRNPA1P58-201ENST00000403629 610 ntBASIC13.64□□□□□ -0.23
KNTC1P50748 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.64□□□□□ -0.23
KNTC1P50748 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 STK24P1-201ENST00000455035 1291 ntBASIC13.64□□□□□ -0.23
KNTC1P50748 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 AC063952.3-201ENST00000467756 308 ntBASIC13.64□□□□□ -0.23
KNTC1P50748 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.64□□□□□ -0.23
KNTC1P50748 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.64□□□□□ -0.23
KNTC1P50748 AC010976.2-201ENST00000609697 852 ntBASIC13.64□□□□□ -0.23
KNTC1P50748 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.64□□□□□ -0.23
KNTC1P50748 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
KNTC1P50748 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.64□□□□□ -0.23
KNTC1P50748 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KNTC1P50748 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.64□□□□□ -0.23
KNTC1P50748 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.63□□□□□ -0.23
KNTC1P50748 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
KNTC1P50748 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
KNTC1P50748 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC13.63□□□□□ -0.23
KNTC1P50748 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.63□□□□□ -0.23
KNTC1P50748 RN7SL277P-201ENST00000481521 288 ntBASIC13.63□□□□□ -0.23
KNTC1P50748 TREHP1-201ENST00000531328 465 ntBASIC13.63□□□□□ -0.23
KNTC1P50748 NDUFB10P1-201ENST00000567319 521 ntBASIC13.63□□□□□ -0.23
KNTC1P50748 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.63□□□□□ -0.23
KNTC1P50748 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
KNTC1P50748 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
KNTC1P50748 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 ACTG1P19-201ENST00000418987 1116 ntBASIC13.63□□□□□ -0.23
KNTC1P50748 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
KNTC1P50748 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 AL133467.4-201ENST00000602953 725 ntBASIC13.63□□□□□ -0.23
KNTC1P50748 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KNTC1P50748 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KNTC1P50748 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KNTC1P50748 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KNTC1P50748 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms