Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.3□□□□□ -0.28
ABCD3P28288 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.3□□□□□ -0.28
ABCD3P28288 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 NAP1L6-202ENST00000641404 1222 ntBASIC13.3□□□□□ -0.28
ABCD3P28288 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 HSPA7-201ENST00000445535 1927 ntBASIC13.3□□□□□ -0.28
ABCD3P28288 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 LINC01230-201ENST00000625222 3017 ntBASIC13.3□□□□□ -0.28
ABCD3P28288 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 AL022313.4-201ENST00000562756 2046 ntBASIC13.3□□□□□ -0.28
ABCD3P28288 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.3□□□□□ -0.28
ABCD3P28288 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.3□□□□□ -0.28
ABCD3P28288 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ABCD3P28288 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 KRT8P21-201ENST00000430398 1491 ntBASIC13.29□□□□□ -0.28
ABCD3P28288 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
ABCD3P28288 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ABCD3P28288 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ABCD3P28288 AC117489.1-201ENST00000625169 3217 ntBASIC13.29□□□□□ -0.28
ABCD3P28288 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ABCD3P28288 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.29□□□□□ -0.28
ABCD3P28288 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.29□□□□□ -0.28
ABCD3P28288 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ABCD3P28288 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
ABCD3P28288 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ABCD3P28288 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 CALR4P-201ENST00000431943 946 ntBASIC13.29□□□□□ -0.28
ABCD3P28288 HIST2H2BC-201ENST00000498492 580 ntBASIC13.29□□□□□ -0.28
ABCD3P28288 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
ABCD3P28288 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.29□□□□□ -0.28
ABCD3P28288 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 AC091544.8-201ENST00000619490 361 ntBASIC13.29□□□□□ -0.28
ABCD3P28288 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 PTENP1-202ENST00000532280 3996 ntBASIC13.29□□□□□ -0.28
ABCD3P28288 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ABCD3P28288 AC041040.2-201ENST00000622926 2899 ntBASIC13.29□□□□□ -0.28
ABCD3P28288 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.29□□□□□ -0.28
ABCD3P28288 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.28□□□□□ -0.28
ABCD3P28288 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 AP002353.1-201ENST00000528257 1599 ntBASIC13.28□□□□□ -0.28
ABCD3P28288 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
ABCD3P28288 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 AL157791.1-201ENST00000553667 1699 ntBASIC13.28□□□□□ -0.28
ABCD3P28288 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
ABCD3P28288 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.28□□□□□ -0.28
ABCD3P28288 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
ABCD3P28288 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms