Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 AC103592.1-201ENST00000394513 664 ntBASIC17.31■□□□□ 0.36
CHMLP26374 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.31■□□□□ 0.36
CHMLP26374 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHMLP26374 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC17.31■□□□□ 0.36
CHMLP26374 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 AL365181.3-201ENST00000605886 3222 ntBASIC17.3■□□□□ 0.36
CHMLP26374 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CHMLP26374 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 TUBB1P2-201ENST00000422712 1306 ntBASIC17.3■□□□□ 0.36
CHMLP26374 TUBB1P1-201ENST00000503144 1300 ntBASIC17.3■□□□□ 0.36
CHMLP26374 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 DPM3-202ENST00000368399 517 ntBASIC17.3■□□□□ 0.36
CHMLP26374 HMGA1P1-201ENST00000415560 1062 ntBASIC17.3■□□□□ 0.36
CHMLP26374 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMLP26374 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMLP26374 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMLP26374 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMLP26374 AC090164.2-201ENST00000611487 516 ntBASIC17.3■□□□□ 0.36
CHMLP26374 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.3■□□□□ 0.36
CHMLP26374 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.3■□□□□ 0.36
CHMLP26374 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMLP26374 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHMLP26374 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHMLP26374 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.3■□□□□ 0.36
CHMLP26374 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHMLP26374 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMLP26374 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 AC073548.1-201ENST00000624088 1882 ntBASIC17.29■□□□□ 0.36
CHMLP26374 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHMLP26374 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMLP26374 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 AC078875.1-201ENST00000431907 724 ntBASIC17.29■□□□□ 0.36
CHMLP26374 AK2P2-201ENST00000439142 405 ntBASIC17.29■□□□□ 0.36
CHMLP26374 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMLP26374 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMLP26374 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.29■□□□□ 0.36
CHMLP26374 AC239800.4-201ENST00000603712 296 ntBASIC17.29■□□□□ 0.36
CHMLP26374 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.29■□□□□ 0.36
CHMLP26374 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.29■□□□□ 0.36
CHMLP26374 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMLP26374 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.29■□□□□ 0.36
CHMLP26374 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHMLP26374 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms