Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFEP18615 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFEP18615 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFEP18615 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NELFEP18615 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFEP18615 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NELFEP18615 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.37□□□□□ -0.11
NELFEP18615 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.37□□□□□ -0.11
NELFEP18615 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 AC100850.1-201ENST00000506768 649 ntBASIC14.37□□□□□ -0.11
NELFEP18615 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.37□□□□□ -0.11
NELFEP18615 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.37□□□□□ -0.11
NELFEP18615 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.37□□□□□ -0.11
NELFEP18615 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.37□□□□□ -0.11
NELFEP18615 AC244452.3-201ENST00000636814 210 ntBASIC14.37□□□□□ -0.11
NELFEP18615 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFEP18615 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFEP18615 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.37□□□□□ -0.11
NELFEP18615 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 NUTM2HP-201ENST00000442076 2498 ntBASIC14.37□□□□□ -0.11
NELFEP18615 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NELFEP18615 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
NELFEP18615 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.37□□□□□ -0.11
NELFEP18615 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NELFEP18615 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 AC018735.1-201ENST00000437208 1502 ntBASIC14.36□□□□□ -0.11
NELFEP18615 LILRP1-201ENST00000444199 1370 ntBASIC14.36□□□□□ -0.11
NELFEP18615 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
NELFEP18615 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
NELFEP18615 RN7SKP175-201ENST00000408472 289 ntBASIC14.36□□□□□ -0.11
NELFEP18615 BCYRN1-201ENST00000418539 200 ntBASIC14.36□□□□□ -0.11
NELFEP18615 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.36□□□□□ -0.11
NELFEP18615 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.36□□□□□ -0.11
NELFEP18615 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.36□□□□□ -0.11
NELFEP18615 AC091804.1-201ENST00000486888 567 ntBASIC14.36□□□□□ -0.11
NELFEP18615 AC126915.1-201ENST00000522847 1038 ntBASIC14.36□□□□□ -0.11
NELFEP18615 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.36□□□□□ -0.11
NELFEP18615 AC138696.2-201ENST00000607376 223 ntBASIC14.36□□□□□ -0.11
NELFEP18615 AL139099.5-201ENST00000635274 300 ntBASIC14.36□□□□□ -0.11
NELFEP18615 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NELFEP18615 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
NELFEP18615 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NELFEP18615 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.36□□□□□ -0.11
NELFEP18615 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NELFEP18615 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms