Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 DKKL1P1-201ENST00000400550 698 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC15.91■□□□□ 0.14
COL11A1P12107 RN7SL128P-201ENST00000467883 305 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 AC083801.1-201ENST00000491689 358 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 TBC1D3P6-201ENST00000505954 962 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 RBM4-207ENST00000506523 654 ntTSL 3 BASIC15.91■□□□□ 0.14
COL11A1P12107 AC090136.2-201ENST00000517809 420 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC15.91■□□□□ 0.14
COL11A1P12107 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC15.91■□□□□ 0.14
COL11A1P12107 ABHD17AP9-201ENST00000561925 548 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 MIR4326-201ENST00000582203 59 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 AL139339.2-201ENST00000608063 657 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 AP000769.1-203ENST00000637245 208 ntBASIC15.91■□□□□ 0.14
COL11A1P12107 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.91■□□□□ 0.14
COL11A1P12107 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
COL11A1P12107 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.91■□□□□ 0.14
COL11A1P12107 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
COL11A1P12107 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
COL11A1P12107 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COL11A1P12107 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.9■□□□□ 0.14
COL11A1P12107 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.9■□□□□ 0.14
COL11A1P12107 GALP-202ENST00000440823 889 ntTSL 5 BASIC15.9■□□□□ 0.14
COL11A1P12107 NALT1-202ENST00000450304 437 ntTSL 3 BASIC15.9■□□□□ 0.14
COL11A1P12107 AC079250.1-201ENST00000456046 531 ntBASIC15.9■□□□□ 0.14
COL11A1P12107 RN7SL288P-201ENST00000490496 291 ntBASIC15.9■□□□□ 0.14
COL11A1P12107 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC15.9■□□□□ 0.14
COL11A1P12107 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.9■□□□□ 0.14
COL11A1P12107 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.9■□□□□ 0.14
COL11A1P12107 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.9■□□□□ 0.14
COL11A1P12107 GGNBP1-204ENST00000613113 887 ntBASIC15.9■□□□□ 0.14
COL11A1P12107 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
COL11A1P12107 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
COL11A1P12107 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.9■□□□□ 0.14
COL11A1P12107 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
COL11A1P12107 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.9■□□□□ 0.14
COL11A1P12107 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL11A1P12107 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
COL11A1P12107 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
COL11A1P12107 OR10N1P-201ENST00000392758 869 ntBASIC15.89■□□□□ 0.13
COL11A1P12107 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC15.89■□□□□ 0.13
COL11A1P12107 NRADDP-201ENST00000437305 691 ntBASIC15.89■□□□□ 0.13
COL11A1P12107 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC15.89■□□□□ 0.13
COL11A1P12107 AC063952.3-201ENST00000467756 308 ntBASIC15.89■□□□□ 0.13
COL11A1P12107 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.89■□□□□ 0.13
COL11A1P12107 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.89■□□□□ 0.13
COL11A1P12107 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.89■□□□□ 0.13
COL11A1P12107 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.89■□□□□ 0.13
COL11A1P12107 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC15.89■□□□□ 0.13
COL11A1P12107 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.89■□□□□ 0.13
COL11A1P12107 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
COL11A1P12107 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.89■□□□□ 0.13
COL11A1P12107 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
COL11A1P12107 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.89■□□□□ 0.13
COL11A1P12107 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 AC008620.2-201ENST00000510294 1569 ntBASIC15.89■□□□□ 0.13
COL11A1P12107 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.89■□□□□ 0.13
COL11A1P12107 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
COL11A1P12107 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 AL513477.1-201ENST00000602865 2407 ntBASIC15.89■□□□□ 0.13
COL11A1P12107 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
COL11A1P12107 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.89■□□□□ 0.13
COL11A1P12107 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.89■□□□□ 0.13
COL11A1P12107 AC024075.2-201ENST00000598112 1473 ntBASIC15.89■□□□□ 0.13
COL11A1P12107 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL11A1P12107 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms