Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CHRNB1P11230 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.58□□□□□ -0.08
CHRNB1P11230 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC14.58□□□□□ -0.08
CHRNB1P11230 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 AC140658.4-201ENST00000561990 352 ntBASIC14.58□□□□□ -0.08
CHRNB1P11230 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.58□□□□□ -0.08
CHRNB1P11230 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRNB1P11230 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CHRNB1P11230 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRNB1P11230 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNB1P11230 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CHRNB1P11230 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
CHRNB1P11230 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHRNB1P11230 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 PYY2-201ENST00000315776 282 ntBASIC14.57□□□□□ -0.08
CHRNB1P11230 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CHRNB1P11230 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CHRNB1P11230 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CHRNB1P11230 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRNB1P11230 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRNB1P11230 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.57□□□□□ -0.08
CHRNB1P11230 PPIA-208ENST00000489459 907 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.57□□□□□ -0.08
CHRNB1P11230 AC226150.1-201ENST00000544259 466 ntBASIC14.57□□□□□ -0.08
CHRNB1P11230 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRNB1P11230 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 PPIA-210ENST00000620047 827 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNB1P11230 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.57□□□□□ -0.08
CHRNB1P11230 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRNB1P11230 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRNB1P11230 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms