Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLTAP09496 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLTAP09496 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.82■□□□□ 0.12
CLTAP09496 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.82■□□□□ 0.12
CLTAP09496 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.82■□□□□ 0.12
CLTAP09496 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CLTAP09496 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 RN7SKP214-201ENST00000364208 315 ntBASIC15.82■□□□□ 0.12
CLTAP09496 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.82■□□□□ 0.12
CLTAP09496 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.82■□□□□ 0.12
CLTAP09496 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.82■□□□□ 0.12
CLTAP09496 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.82■□□□□ 0.12
CLTAP09496 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.82■□□□□ 0.12
CLTAP09496 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.82■□□□□ 0.12
CLTAP09496 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.82■□□□□ 0.12
CLTAP09496 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CLTAP09496 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.82■□□□□ 0.12
CLTAP09496 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLTAP09496 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.82■□□□□ 0.12
CLTAP09496 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.82■□□□□ 0.12
CLTAP09496 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.82■□□□□ 0.12
CLTAP09496 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CLTAP09496 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CLTAP09496 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CLTAP09496 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
CLTAP09496 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLTAP09496 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.82■□□□□ 0.12
CLTAP09496 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.81■□□□□ 0.12
CLTAP09496 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.81■□□□□ 0.12
CLTAP09496 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CLTAP09496 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
CLTAP09496 KRT18P36-201ENST00000411618 1276 ntBASIC15.81■□□□□ 0.12
CLTAP09496 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.81■□□□□ 0.12
CLTAP09496 AHCYP4-201ENST00000419201 1315 ntBASIC15.81■□□□□ 0.12
CLTAP09496 XBP1P1-201ENST00000436573 652 ntBASIC15.81■□□□□ 0.12
CLTAP09496 ST13P19-201ENST00000442505 1124 ntBASIC15.81■□□□□ 0.12
CLTAP09496 AC005077.2-201ENST00000449786 690 ntBASIC15.81■□□□□ 0.12
CLTAP09496 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 RCC2P8-201ENST00000502779 1035 ntBASIC15.81■□□□□ 0.12
CLTAP09496 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.81■□□□□ 0.12
CLTAP09496 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CLTAP09496 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.81■□□□□ 0.12
CLTAP09496 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.81■□□□□ 0.12
CLTAP09496 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.81■□□□□ 0.12
CLTAP09496 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.81■□□□□ 0.12
CLTAP09496 ACTG1P17-201ENST00000558391 1119 ntBASIC15.81■□□□□ 0.12
CLTAP09496 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.81■□□□□ 0.12
CLTAP09496 AC005586.2-201ENST00000563946 837 ntBASIC15.81■□□□□ 0.12
CLTAP09496 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.81■□□□□ 0.12
CLTAP09496 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.81■□□□□ 0.12
CLTAP09496 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CLTAP09496 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLTAP09496 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms