Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.19□□□□□ -0.3
HTR1AP08908 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HTR1AP08908 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
HTR1AP08908 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.19□□□□□ -0.3
HTR1AP08908 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.19□□□□□ -0.3
HTR1AP08908 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.19□□□□□ -0.3
HTR1AP08908 TSEN15P1-201ENST00000423257 515 ntBASIC13.19□□□□□ -0.3
HTR1AP08908 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.19□□□□□ -0.3
HTR1AP08908 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.19□□□□□ -0.3
HTR1AP08908 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.19□□□□□ -0.3
HTR1AP08908 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.19□□□□□ -0.3
HTR1AP08908 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 AC025678.2-201ENST00000562061 970 ntBASIC13.19□□□□□ -0.3
HTR1AP08908 AC004449.1-201ENST00000564240 433 ntBASIC13.19□□□□□ -0.3
HTR1AP08908 AC036164.1-201ENST00000570544 333 ntBASIC13.19□□□□□ -0.3
HTR1AP08908 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.19□□□□□ -0.3
HTR1AP08908 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.19□□□□□ -0.3
HTR1AP08908 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 AGGF1P10-201ENST00000635005 2191 ntBASIC13.19□□□□□ -0.3
HTR1AP08908 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 ABCD1P2-201ENST00000429313 1601 ntBASIC13.19□□□□□ -0.3
HTR1AP08908 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HTR1AP08908 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.19□□□□□ -0.3
HTR1AP08908 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.19□□□□□ -0.3
HTR1AP08908 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.19□□□□□ -0.3
HTR1AP08908 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
HTR1AP08908 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HTR1AP08908 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.18□□□□□ -0.3
HTR1AP08908 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.18□□□□□ -0.3
HTR1AP08908 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HTR1AP08908 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
HTR1AP08908 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.18□□□□□ -0.3
HTR1AP08908 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 KRT18P13-201ENST00000400056 1290 ntBASIC13.18□□□□□ -0.3
HTR1AP08908 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.18□□□□□ -0.3
HTR1AP08908 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.18□□□□□ -0.3
HTR1AP08908 FAM86LP-201ENST00000478302 853 ntBASIC13.18□□□□□ -0.3
HTR1AP08908 AC026410.3-201ENST00000514280 936 ntBASIC13.18□□□□□ -0.3
HTR1AP08908 AC092865.5-201ENST00000545435 363 ntBASIC13.18□□□□□ -0.3
HTR1AP08908 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HTR1AP08908 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.18□□□□□ -0.3
HTR1AP08908 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
HTR1AP08908 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.18□□□□□ -0.3
HTR1AP08908 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HTR1AP08908 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HTR1AP08908 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.17□□□□□ -0.3
HTR1AP08908 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HTR1AP08908 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.17□□□□□ -0.3
HTR1AP08908 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 BTBD7P1-201ENST00000447253 1453 ntBASIC13.17□□□□□ -0.3
HTR1AP08908 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HTR1AP08908 AC110048.1-201ENST00000604293 2157 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms