Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.36■□□□□ 0.37
APPP05067 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.36■□□□□ 0.37
APPP05067 AL805961.1-203ENST00000641078 1258 ntBASIC17.36■□□□□ 0.37
APPP05067 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
APPP05067 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APPP05067 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
APPP05067 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APPP05067 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
APPP05067 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APPP05067 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
APPP05067 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APPP05067 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.36■□□□□ 0.37
APPP05067 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.36■□□□□ 0.37
APPP05067 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
APPP05067 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
APPP05067 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
APPP05067 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 AL009178.2-201ENST00000597278 2719 ntBASIC17.35■□□□□ 0.37
APPP05067 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.35■□□□□ 0.37
APPP05067 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.35■□□□□ 0.37
APPP05067 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
APPP05067 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
APPP05067 RN7SKP214-201ENST00000364208 315 ntBASIC17.35■□□□□ 0.37
APPP05067 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.35■□□□□ 0.37
APPP05067 AC078875.1-201ENST00000431907 724 ntBASIC17.35■□□□□ 0.37
APPP05067 CALR4P-201ENST00000431943 946 ntBASIC17.35■□□□□ 0.37
APPP05067 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.35■□□□□ 0.37
APPP05067 ST13P19-201ENST00000442505 1124 ntBASIC17.35■□□□□ 0.37
APPP05067 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC17.35■□□□□ 0.37
APPP05067 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.35■□□□□ 0.37
APPP05067 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.35■□□□□ 0.37
APPP05067 AC124068.2-201ENST00000569473 1109 ntBASIC17.35■□□□□ 0.37
APPP05067 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.35■□□□□ 0.37
APPP05067 AL645939.5-201ENST00000606834 243 ntBASIC17.35■□□□□ 0.37
APPP05067 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.35■□□□□ 0.37
APPP05067 TUBBP5-203ENST00000508529 1334 ntBASIC17.35■□□□□ 0.37
APPP05067 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.35■□□□□ 0.37
APPP05067 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.35■□□□□ 0.37
APPP05067 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.35■□□□□ 0.37
APPP05067 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
APPP05067 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
APPP05067 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
APPP05067 USP3-204ENST00000540797 5474 ntTSL 2 BASIC17.34■□□□□ 0.37
APPP05067 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.34■□□□□ 0.37
APPP05067 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC17.34■□□□□ 0.37
APPP05067 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
APPP05067 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.34■□□□□ 0.37
APPP05067 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.34■□□□□ 0.37
APPP05067 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 PGAM1P5-201ENST00000548011 764 ntBASIC17.34■□□□□ 0.37
APPP05067 AC003686.1-201ENST00000550956 1034 ntBASIC17.34■□□□□ 0.37
APPP05067 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.34■□□□□ 0.37
APPP05067 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.34■□□□□ 0.37
APPP05067 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.34■□□□□ 0.37
APPP05067 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.34■□□□□ 0.37
APPP05067 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
APPP05067 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.34■□□□□ 0.37
APPP05067 AC131212.3-201ENST00000624087 4219 ntBASIC17.34■□□□□ 0.37
APPP05067 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
APPP05067 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
APPP05067 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
APPP05067 AC092053.3-201ENST00000641308 4975 ntBASIC17.33■□□□□ 0.37
APPP05067 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
APPP05067 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
APPP05067 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
APPP05067 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms