Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV3P03979 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV3P03979 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 TUBB8P8-201ENST00000458717 1058 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC11.41□□□□□ -0.58
TRGV3P03979 FAM8A2P-201ENST00000528813 1142 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.41□□□□□ -0.58
TRGV3P03979 AC005730.2-201ENST00000564549 1184 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 AC007663.3-201ENST00000609632 465 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 AC005695.3-201ENST00000614522 232 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 PRKN-211ENST00000615065 261 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 AL023803.2-201ENST00000620080 638 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 AL162426.1-201ENST00000624141 743 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
TRGV3P03979 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 RN7SL832P-201ENST00000607781 1756 ntBASIC11.41□□□□□ -0.58
TRGV3P03979 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.41□□□□□ -0.58
TRGV3P03979 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TRGV3P03979 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
TRGV3P03979 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.4□□□□□ -0.58
TRGV3P03979 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 MIR663B-201ENST00000408361 115 ntBASIC11.4□□□□□ -0.58
TRGV3P03979 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 AL157407.1-201ENST00000435784 904 ntBASIC11.4□□□□□ -0.58
TRGV3P03979 POM121L10P-201ENST00000436994 1285 ntBASIC11.4□□□□□ -0.58
TRGV3P03979 RNMTL1P1-201ENST00000454103 560 ntBASIC11.4□□□□□ -0.58
TRGV3P03979 APOA2-204ENST00000464492 530 ntTSL 3 BASIC11.4□□□□□ -0.58
TRGV3P03979 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC11.4□□□□□ -0.58
TRGV3P03979 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.4□□□□□ -0.58
TRGV3P03979 AC005586.2-201ENST00000563946 837 ntBASIC11.4□□□□□ -0.58
TRGV3P03979 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC11.4□□□□□ -0.58
TRGV3P03979 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.4□□□□□ -0.58
TRGV3P03979 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC11.4□□□□□ -0.58
TRGV3P03979 AC005962.1-201ENST00000584100 773 ntBASIC11.4□□□□□ -0.58
TRGV3P03979 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
TRGV3P03979 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 RPL35-206ENST00000629845 340 ntTSL 5 BASIC11.4□□□□□ -0.58
TRGV3P03979 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.4□□□□□ -0.58
TRGV3P03979 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TRGV3P03979 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC11.4□□□□□ -0.58
TRGV3P03979 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms