Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CNOT4O95628 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.91□□□□□ -0.34
CNOT4O95628 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CNOT4O95628 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.9□□□□□ -0.34
CNOT4O95628 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 AC007191.1-201ENST00000623179 2995 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.9□□□□□ -0.34
CNOT4O95628 AC018529.2-202ENST00000611482 3087 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CNOT4O95628 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CNOT4O95628 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.9□□□□□ -0.34
CNOT4O95628 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 MIR769-201ENST00000390225 118 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CNOT4O95628 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 VDAC1P1-201ENST00000439229 848 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 TPT1P11-201ENST00000458482 498 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 RPL18P13-201ENST00000478088 569 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 AC044849.1-201ENST00000519737 1188 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 AL160314.3-201ENST00000556041 767 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.9□□□□□ -0.34
CNOT4O95628 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 AC027237.1-201ENST00000560942 655 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.9□□□□□ -0.34
CNOT4O95628 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.9□□□□□ -0.34
CNOT4O95628 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CNOT4O95628 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CNOT4O95628 CU633904.3-201ENST00000624042 1029 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.9□□□□□ -0.34
CNOT4O95628 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
CNOT4O95628 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 AC015688.4-201ENST00000580780 1647 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
CNOT4O95628 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.9□□□□□ -0.34
CNOT4O95628 KRT8P19-201ENST00000551916 1455 ntBASIC12.9□□□□□ -0.34
CNOT4O95628 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CNOT4O95628 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
CNOT4O95628 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.9□□□□□ -0.35
CNOT4O95628 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.9□□□□□ -0.35
CNOT4O95628 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
CNOT4O95628 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
CNOT4O95628 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.9□□□□□ -0.35
CNOT4O95628 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 AC144522.1-201ENST00000625111 1658 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
CNOT4O95628 AHCYP4-201ENST00000419201 1315 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.89□□□□□ -0.35
CNOT4O95628 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
CNOT4O95628 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CNOT4O95628 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
CNOT4O95628 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms