Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC138969.2-201ENST00000532739 9932 ntBASIC16.43■□□□□ 0.22
ATP2A1O14983 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 Z69890.1-201ENST00000382990 339 ntBASIC16.43■□□□□ 0.22
ATP2A1O14983 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP2A1O14983 AC092638.2-201ENST00000441105 947 ntBASIC16.43■□□□□ 0.22
ATP2A1O14983 AC018463.1-201ENST00000456674 917 ntBASIC16.43■□□□□ 0.22
ATP2A1O14983 CTBP2P4-201ENST00000513884 920 ntBASIC16.43■□□□□ 0.22
ATP2A1O14983 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP2A1O14983 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP2A1O14983 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP2A1O14983 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.43■□□□□ 0.22
ATP2A1O14983 AC105137.3-201ENST00000617588 984 ntBASIC16.43■□□□□ 0.22
ATP2A1O14983 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP2A1O14983 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
ATP2A1O14983 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 CICP14-201ENST00000629111 2732 ntBASIC16.43■□□□□ 0.22
ATP2A1O14983 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.43■□□□□ 0.22
ATP2A1O14983 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP2A1O14983 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.43■□□□□ 0.22
ATP2A1O14983 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ATP2A1O14983 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A1O14983 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ATP2A1O14983 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A1O14983 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A1O14983 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 ERP29P1-201ENST00000442902 706 ntBASIC16.42■□□□□ 0.22
ATP2A1O14983 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.42■□□□□ 0.22
ATP2A1O14983 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP2A1O14983 RN7SL470P-201ENST00000583069 259 ntBASIC16.42■□□□□ 0.22
ATP2A1O14983 SIGLEC22P-201ENST00000599104 714 ntBASIC16.42■□□□□ 0.22
ATP2A1O14983 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.42■□□□□ 0.22
ATP2A1O14983 AC005041.3-201ENST00000606287 649 ntBASIC16.42■□□□□ 0.22
ATP2A1O14983 AC107464.3-201ENST00000609172 737 ntBASIC16.42■□□□□ 0.22
ATP2A1O14983 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A1O14983 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
ATP2A1O14983 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP2A1O14983 TEKT4P2-202ENST00000559466 1312 ntBASIC16.42■□□□□ 0.22
ATP2A1O14983 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A1O14983 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A1O14983 AC006372.4-201ENST00000624122 1543 ntBASIC16.41■□□□□ 0.22
ATP2A1O14983 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A1O14983 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A1O14983 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A1O14983 MTHFR-210ENST00000641407 2387 ntBASIC16.41■□□□□ 0.22
ATP2A1O14983 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A1O14983 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A1O14983 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ATP2A1O14983 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A1O14983 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A1O14983 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A1O14983 AC098934.1-203ENST00000442868 1262 ntBASIC16.41■□□□□ 0.22
ATP2A1O14983 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A1O14983 TPT1P11-201ENST00000458482 498 ntBASIC16.41■□□□□ 0.22
ATP2A1O14983 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A1O14983 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP2A1O14983 AC022447.6-201ENST00000515522 438 ntBASIC16.41■□□□□ 0.22
ATP2A1O14983 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A1O14983 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A1O14983 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP2A1O14983 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP2A1O14983 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP2A1O14983 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A1O14983 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms