Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN5O00501 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.16■□□□□ 0.02
CLDN5O00501 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CLDN5O00501 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CLDN5O00501 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.16■□□□□ 0.02
CLDN5O00501 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CLDN5O00501 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN5O00501 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN5O00501 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN5O00501 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLDN5O00501 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.15■□□□□ 0.02
CLDN5O00501 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN5O00501 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 RPL8P2-201ENST00000430538 502 ntBASIC15.15■□□□□ 0.02
CLDN5O00501 CEP164P1-201ENST00000455142 418 ntBASIC15.15■□□□□ 0.02
CLDN5O00501 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN5O00501 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.15■□□□□ 0.02
CLDN5O00501 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 MIR3907-201ENST00000579424 151 ntBASIC15.15■□□□□ 0.02
CLDN5O00501 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CLDN5O00501 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN5O00501 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN5O00501 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
CLDN5O00501 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN5O00501 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CLDN5O00501 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.15■□□□□ 0.02
CLDN5O00501 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CLDN5O00501 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.15■□□□□ 0.02
CLDN5O00501 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CLDN5O00501 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN5O00501 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CLDN5O00501 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN5O00501 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN5O00501 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN5O00501 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.14■□□□□ 0.01
CLDN5O00501 RPSAP15-201ENST00000448168 861 ntBASIC15.14■□□□□ 0.01
CLDN5O00501 RN7SL258P-201ENST00000478664 300 ntBASIC15.14■□□□□ 0.01
CLDN5O00501 RN7SL67P-201ENST00000492147 296 ntBASIC15.14■□□□□ 0.01
CLDN5O00501 ALG1L13P-202ENST00000519320 584 ntBASIC15.14■□□□□ 0.01
CLDN5O00501 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC15.14■□□□□ 0.01
CLDN5O00501 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 AC106872.11-201ENST00000605838 421 ntBASIC15.14■□□□□ 0.01
CLDN5O00501 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.14■□□□□ 0.01
CLDN5O00501 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.14■□□□□ 0.01
CLDN5O00501 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CLDN5O00501 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CLDN5O00501 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms