Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.11□□□□□ -0.31
TMEM129A0AVI4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 KLF2P2-201ENST00000416807 1039 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RPS2P32-201ENST00000439199 892 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AC007274.1-201ENST00000439805 662 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 KRT223P-202ENST00000449164 1292 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 KRT18P25-201ENST00000508931 1278 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AP000812.2-201ENST00000538934 718 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AP001002.3-201ENST00000623482 206 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AC019294.4-201ENST00000561777 2905 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 AL138725.1-201ENST00000407347 1314 ntBASIC13.1□□□□□ -0.31
TMEM129A0AVI4 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM129A0AVI4 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM129A0AVI4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms