Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 SETP8-201ENST00000435341 628 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC110760.3-202ENST00000515177 371 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 OR4A48P-201ENST00000531359 391 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 DUX4L46-201ENST00000566845 751 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 EEF1DP1-201ENST00000585891 896 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC010328.2-201ENST00000597698 1111 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC007620.3-201ENST00000608131 497 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC016542.1-201ENST00000608259 493 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC243960.7-201ENST00000623532 707 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC007224.2-201ENST00000625011 510 ntBASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB13Q9Y5F0 AC027601.5-201ENST00000624065 2482 ntBASIC16.21■□□□□ 0.18
PCDHB13Q9Y5F0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB13Q9Y5F0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB13Q9Y5F0 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 MIR326-201ENST00000362220 95 ntBASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 BTBD7P2-201ENST00000441962 620 ntBASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 OR4A19P-201ENST00000533579 1103 ntBASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AC020978.7-201ENST00000575953 1187 ntBASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 MIR4741-201ENST00000579822 90 ntBASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 VN1R87P-201ENST00000596706 487 ntBASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AC091614.1-201ENST00000606898 879 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AL512324.3-201ENST00000619383 882 ntBASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB13Q9Y5F0 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 KRT8P28-201ENST00000433288 1390 ntBASIC16.19■□□□□ 0.18
PCDHB13Q9Y5F0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms