Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC093726.1-201ENST00000608064 963 ntBASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC005252.2-201ENST00000624630 1141 ntBASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 KRT8P28-201ENST00000433288 1390 ntBASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
UBE2D4Q9Y2X8 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 LINC02486-201ENST00000604157 3000 ntBASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AL928654.5-201ENST00000624831 2501 ntBASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AK2P2-201ENST00000439142 405 ntBASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 MYCLP2-201ENST00000449268 967 ntBASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AC092552.1-201ENST00000547243 906 ntBASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AC133539.2-201ENST00000604757 467 ntBASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AC138466.3-201ENST00000619983 221 ntBASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
UBE2D4Q9Y2X8 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms