Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 AL645937.2-201ENST00000396808 931 ntBASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 FAM86C2P-203ENST00000528684 1004 ntBASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 AC023511.2-201ENST00000618803 211 ntBASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 MIR6069-201ENST00000620069 79 ntBASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.7□□□□□ -0.22
NKX1-2Q9UD57 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 AC126564.1-201ENST00000623628 2013 ntBASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 BHMT-201ENST00000274353 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 HCG4P8-203ENST00000443049 980 ntBASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 AC064836.3-201ENST00000607928 673 ntBASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
NKX1-2Q9UD57 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 KDM2B-219ENST00000611216 3434 ntTSL 5 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NKX1-2Q9UD57 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms