Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LRFN1Q9P244 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.27□□□□□ -0.28
LRFN1Q9P244 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LRFN1Q9P244 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 OR2K2-202ENST00000374428 1038 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 RN7SL530P-201ENST00000485097 298 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 RN7SL67P-201ENST00000492147 296 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC019193.1-201ENST00000506678 823 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC005586.2-201ENST00000563946 837 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 AC021016.3-201ENST00000608367 477 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 MEG3_2.1-201ENST00000611456 105 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 KRT18P9-201ENST00000604826 1300 ntBASIC13.27□□□□□ -0.29
LRFN1Q9P244 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.27□□□□□ -0.29
LRFN1Q9P244 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LRFN1Q9P244 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 INTS4P1-203ENST00000641008 3683 ntBASIC13.26□□□□□ -0.29
LRFN1Q9P244 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 AL627231.1-201ENST00000394467 1125 ntBASIC13.26□□□□□ -0.29
LRFN1Q9P244 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 RPL8P2-201ENST00000430538 502 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms