Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 RNA5SP359-201ENST00000364838 113 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 KRT18P36-201ENST00000411618 1276 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AQP7P5-201ENST00000428759 1049 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AQP7P4-201ENST00000447083 1042 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AQP7P2-201ENST00000453967 1041 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 DPY19L2P5-201ENST00000456300 331 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AC011471.3-201ENST00000623576 402 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AQP7P3-201ENST00000624547 1041 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCC1Q9HA90 MARK2P16-201ENST00000605714 1723 ntBASIC16.82■□□□□ 0.28
EFCC1Q9HA90 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 COX20P1-201ENST00000366529 357 ntBASIC16.81■□□□□ 0.28
EFCC1Q9HA90 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.81■□□□□ 0.28
EFCC1Q9HA90 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 AC093909.3-201ENST00000504783 336 ntBASIC16.81■□□□□ 0.28
EFCC1Q9HA90 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 AC055811.3-201ENST00000584952 686 ntBASIC16.81■□□□□ 0.28
EFCC1Q9HA90 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.81■□□□□ 0.28
EFCC1Q9HA90 AL356585.2-201ENST00000625078 2396 ntBASIC16.81■□□□□ 0.28
EFCC1Q9HA90 AL365209.1-201ENST00000624418 6473 ntBASIC16.81■□□□□ 0.28
EFCC1Q9HA90 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCC1Q9HA90 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCC1Q9HA90 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms