Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 AC011477.7-201ENST00000617163 1440 ntBASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 RCC2P5-201ENST00000492126 1487 ntBASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.93■□□□□ 0.46
SHANK3Q9BYB0 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 FAM197Y6-201ENST00000420524 766 ntBASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 RN7SL524P-201ENST00000581152 300 ntBASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 AC106782.5-201ENST00000616011 337 ntBASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 MEP1AP1-201ENST00000636082 1097 ntBASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SHANK3Q9BYB0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 PTN-202ENST00000393083 1599 ntTSL 5 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 MAGEA7P-201ENST00000436482 942 ntBASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 CCND3P1-201ENST00000438347 580 ntBASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 AC048382.6-201ENST00000621980 1223 ntBASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SHANK3Q9BYB0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SHANK3Q9BYB0 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms