Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.33■□□□□ 0.21
SYNGAP1Q96PV0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SYNGAP1Q96PV0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SYNGAP1Q96PV0 OR2I1P-210ENST00000642037 4691 ntBASIC16.33■□□□□ 0.21
SYNGAP1Q96PV0 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SYNGAP1Q96PV0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.33■□□□□ 0.21
SYNGAP1Q96PV0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 AC140658.4-201ENST00000561990 352 ntBASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 MTHFR-210ENST00000641407 2387 ntBASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SYNGAP1Q96PV0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 MIR645-201ENST00000385283 94 ntBASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 RPL18AP8-201ENST00000486071 528 ntBASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC021016.3-201ENST00000608367 477 ntBASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SYNGAP1Q96PV0 AC007686.3-201ENST00000619017 3487 ntBASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 OR2I1P-209ENST00000641730 5365 ntBASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.31■□□□□ 0.2
SYNGAP1Q96PV0 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms