Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 AL928654.5-201ENST00000624831 2501 ntBASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 MEP1AP4-201ENST00000423244 1087 ntBASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 AC104596.2-201ENST00000512793 793 ntBASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 AC005586.2-201ENST00000563946 837 ntBASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
NSMCE2Q96MF7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AC020910.5-201ENST00000623668 1865 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AP002761.4-201ENST00000565433 3361 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 SOCS2P1-201ENST00000417727 557 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 ARSEP1-201ENST00000420443 635 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AL161932.2-201ENST00000435436 679 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 DOC2GP-202ENST00000514950 1163 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AC124283.3-201ENST00000570869 594 ntBASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.67□□□□□ -0.22
NSMCE2Q96MF7 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms