Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC007431.3-201ENST00000623221 587 ntBASIC12.59□□□□□ -0.39
CCDC107Q8WV48 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 AC090643.2-201ENST00000623442 2029 ntBASIC12.59□□□□□ -0.39
CCDC107Q8WV48 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 TSN-212ENST00000536142 3328 ntTSL 2 BASIC12.59□□□□□ -0.39
CCDC107Q8WV48 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCDC107Q8WV48 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CCDC107Q8WV48 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.58□□□□□ -0.39
CCDC107Q8WV48 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.58□□□□□ -0.39
CCDC107Q8WV48 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 KRT8P14-201ENST00000414254 1442 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 CES1P1-201ENST00000421606 1704 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 CYMP-203ENST00000474680 1263 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC123567.1-201ENST00000548294 1261 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AL359711.2-201ENST00000563105 872 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 RRP7BP-205ENST00000566851 833 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 MIR6074-201ENST00000612054 107 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC008761.3-201ENST00000624803 892 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC011481.3-201ENST00000623895 5594 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 AC007541.1-201ENST00000570282 1469 ntBASIC12.58□□□□□ -0.4
CCDC107Q8WV48 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CCDC107Q8WV48 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CCDC107Q8WV48 CICP16-201ENST00000502609 2813 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms