Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 ST13P19-201ENST00000442505 1124 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AC012441.2-201ENST00000444843 739 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AC017083.2-201ENST00000608069 979 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AL162426.1-201ENST00000624141 743 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 COX11-210ENST00000639671 696 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
NUP43Q8NFH3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 FAM21FP-201ENST00000426241 1131 ntBASIC13.52□□□□□ -0.25
NUP43Q8NFH3 TMEM198B-204ENST00000484016 896 ntBASIC13.52□□□□□ -0.25
NUP43Q8NFH3 AC119751.2-201ENST00000504529 210 ntBASIC13.52□□□□□ -0.25
NUP43Q8NFH3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 AC005962.1-201ENST00000584100 773 ntBASIC13.52□□□□□ -0.25
NUP43Q8NFH3 AC010328.2-201ENST00000597698 1111 ntBASIC13.52□□□□□ -0.25
NUP43Q8NFH3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 AC015818.8-201ENST00000587907 1519 ntBASIC13.52□□□□□ -0.25
NUP43Q8NFH3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NUP43Q8NFH3 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NUP43Q8NFH3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms