Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIML2Q8N7C3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIML2Q8N7C3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIML2Q8N7C3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIML2Q8N7C3 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TRIML2Q8N7C3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.15
TRIML2Q8N7C3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRIML2Q8N7C3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TRIML2Q8N7C3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.08□□□□□ -0.15
TRIML2Q8N7C3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.08□□□□□ -0.15
TRIML2Q8N7C3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
TRIML2Q8N7C3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 INGX-202ENST00000489074 768 ntBASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 AC123567.1-201ENST00000548294 1261 ntBASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 AL359711.2-201ENST00000563105 872 ntBASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 AL136172.1-201ENST00000598590 1394 ntBASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 PCDHB18P-202ENST00000526308 3197 ntBASIC14.08□□□□□ -0.16
TRIML2Q8N7C3 AC023794.5-201ENST00000564380 2157 ntBASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 ACKR1-201ENST00000368121 1240 ntBASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 ACTBP8-201ENST00000403258 1108 ntBASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 AC005498.2-205ENST00000593218 784 ntBASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 AC073869.1-201ENST00000415574 2762 ntBASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIML2Q8N7C3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms