Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AC027237.1-201ENST00000560942 655 ntBASIC15.08■□□□□ 0
TTC39BQ5VTQ0 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AC005962.1-201ENST00000584100 773 ntBASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AC090164.2-201ENST00000611487 516 ntBASIC15.08■□□□□ 0
TTC39BQ5VTQ0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
TTC39BQ5VTQ0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.07■□□□□ 0
TTC39BQ5VTQ0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 AL160314.3-201ENST00000556041 767 ntBASIC15.07■□□□□ 0
TTC39BQ5VTQ0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 MIR3615-201ENST00000581999 87 ntBASIC15.07■□□□□ 0
TTC39BQ5VTQ0 AC008805.1-201ENST00000590892 364 ntBASIC15.07■□□□□ 0
TTC39BQ5VTQ0 AL451050.2-201ENST00000606967 682 ntBASIC15.07■□□□□ 0
TTC39BQ5VTQ0 AC133540.1-201ENST00000620845 1019 ntBASIC15.07■□□□□ 0
TTC39BQ5VTQ0 GPR182-203ENST00000622922 591 ntBASIC15.07■□□□□ 0
TTC39BQ5VTQ0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TTC39BQ5VTQ0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TTC39BQ5VTQ0 NKAIN1P1-201ENST00000435754 582 ntBASIC15.06■□□□□ 0
TTC39BQ5VTQ0 AC011742.3-201ENST00000439053 820 ntBASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms