Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 AC093300.1-201ENST00000510368 1201 ntBASIC13.73□□□□□ -0.21
RIF1Q5UIP0 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 AL139317.2-201ENST00000556998 158 ntBASIC13.73□□□□□ -0.21
RIF1Q5UIP0 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 KRT8P38-201ENST00000441370 1430 ntBASIC13.73□□□□□ -0.21
RIF1Q5UIP0 AC069061.4-201ENST00000581294 1347 ntBASIC13.73□□□□□ -0.21
RIF1Q5UIP0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.73□□□□□ -0.21
RIF1Q5UIP0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 HNRNPA1P59-201ENST00000430583 918 ntBASIC13.72□□□□□ -0.21
RIF1Q5UIP0 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 RN7SL677P-201ENST00000466970 319 ntBASIC13.72□□□□□ -0.21
RIF1Q5UIP0 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RIF1Q5UIP0 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 HSD3BP1-201ENST00000286193 1111 ntBASIC13.71□□□□□ -0.21
RIF1Q5UIP0 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 KRT8P18-201ENST00000413425 1445 ntBASIC13.71□□□□□ -0.21
RIF1Q5UIP0 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 CETN3-205ENST00000522842 664 ntTSL 2 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 FAM187B2P-201ENST00000577135 713 ntBASIC13.71□□□□□ -0.21
RIF1Q5UIP0 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 BOLA3P2-201ENST00000586496 323 ntBASIC13.71□□□□□ -0.21
RIF1Q5UIP0 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC13.71□□□□□ -0.21
RIF1Q5UIP0 AC063977.2-201ENST00000601996 421 ntBASIC13.71□□□□□ -0.21
RIF1Q5UIP0 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms