Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC098935.1-201ENST00000446057 611 ntBASIC15.33■□□□□ 0.04
VARS2Q5ST30 NDUFS6P1-201ENST00000485187 316 ntBASIC15.33■□□□□ 0.04
VARS2Q5ST30 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 KRT8P1-201ENST00000557533 1207 ntBASIC15.33■□□□□ 0.04
VARS2Q5ST30 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 AC005632.3-201ENST00000605544 308 ntBASIC15.33■□□□□ 0.04
VARS2Q5ST30 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC15.33■□□□□ 0.04
VARS2Q5ST30 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
VARS2Q5ST30 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 GIMAP7-201ENST00000313543 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 AL512430.1-201ENST00000392575 860 ntBASIC15.32■□□□□ 0.04
VARS2Q5ST30 MGST1-204ENST00000396209 979 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 DUXAP7-201ENST00000431038 689 ntBASIC15.32■□□□□ 0.04
VARS2Q5ST30 AC078991.1-201ENST00000437297 610 ntBASIC15.32■□□□□ 0.04
VARS2Q5ST30 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 KATNBL1P4-201ENST00000503545 918 ntBASIC15.32■□□□□ 0.04
VARS2Q5ST30 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 MIR4522-201ENST00000584932 87 ntBASIC15.32■□□□□ 0.04
VARS2Q5ST30 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 AC009560.1-201ENST00000620208 434 ntBASIC15.32■□□□□ 0.04
VARS2Q5ST30 RFC1-217ENST00000639695 867 ntTSL 5 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
VARS2Q5ST30 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
VARS2Q5ST30 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 MARK2P16-201ENST00000605714 1723 ntBASIC15.31■□□□□ 0.04
VARS2Q5ST30 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
VARS2Q5ST30 FTH1P22-201ENST00000456305 520 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms