Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
YBX1P67809 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 PFN1P12-201ENST00000455938 534 ntBASIC14.06□□□□□ -0.16
YBX1P67809 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.06□□□□□ -0.16
YBX1P67809 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.06□□□□□ -0.16
YBX1P67809 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
YBX1P67809 SORD2P-201ENST00000558556 1069 ntBASIC14.06□□□□□ -0.16
YBX1P67809 AL606495.2-201ENST00000605867 535 ntBASIC14.06□□□□□ -0.16
YBX1P67809 AL451050.2-201ENST00000606967 682 ntBASIC14.06□□□□□ -0.16
YBX1P67809 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.06□□□□□ -0.16
YBX1P67809 AL356585.2-201ENST00000625078 2396 ntBASIC14.06□□□□□ -0.16
YBX1P67809 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 AC144522.1-201ENST00000625111 1658 ntBASIC14.06□□□□□ -0.16
YBX1P67809 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
YBX1P67809 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.06□□□□□ -0.16
YBX1P67809 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.06□□□□□ -0.16
YBX1P67809 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.06□□□□□ -0.16
YBX1P67809 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
YBX1P67809 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
YBX1P67809 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 TCAM1P-207ENST00000485295 1537 ntBASIC14.05□□□□□ -0.16
YBX1P67809 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
YBX1P67809 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.05□□□□□ -0.16
YBX1P67809 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.05□□□□□ -0.16
YBX1P67809 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.05□□□□□ -0.16
YBX1P67809 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.05□□□□□ -0.16
YBX1P67809 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
YBX1P67809 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
YBX1P67809 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.05□□□□□ -0.16
YBX1P67809 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 AC083964.2-201ENST00000623988 2396 ntBASIC14.04□□□□□ -0.16
YBX1P67809 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
YBX1P67809 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
YBX1P67809 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
YBX1P67809 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms