Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN6P56747 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLDN6P56747 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDN6P56747 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN6P56747 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.82□□□□□ -0.2
CLDN6P56747 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 LINC01815-202ENST00000641468 1409 ntBASIC13.81□□□□□ -0.2
CLDN6P56747 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN6P56747 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 PYY2-201ENST00000315776 282 ntBASIC13.81□□□□□ -0.2
CLDN6P56747 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLDN6P56747 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN6P56747 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN6P56747 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC13.81□□□□□ -0.2
CLDN6P56747 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 RNA5SP406-201ENST00000516106 112 ntBASIC13.81□□□□□ -0.2
CLDN6P56747 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN6P56747 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN6P56747 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLDN6P56747 MIR2392-201ENST00000584881 84 ntBASIC13.81□□□□□ -0.2
CLDN6P56747 AP001527.2-201ENST00000614441 631 ntBASIC13.81□□□□□ -0.2
CLDN6P56747 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN6P56747 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLDN6P56747 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN6P56747 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 AC091951.1-201ENST00000512854 2465 ntBASIC13.81□□□□□ -0.2
CLDN6P56747 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLDN6P56747 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CLDN6P56747 AC009093.10-201ENST00000641956 1442 ntBASIC13.81□□□□□ -0.2
CLDN6P56747 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CLDN6P56747 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN6P56747 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN6P56747 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
CLDN6P56747 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CLDN6P56747 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CLDN6P56747 COX20P1-201ENST00000366529 357 ntBASIC13.8□□□□□ -0.2
CLDN6P56747 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.8□□□□□ -0.2
CLDN6P56747 GCSHP3-201ENST00000431120 391 ntBASIC13.8□□□□□ -0.2
CLDN6P56747 ST13P19-201ENST00000442505 1124 ntBASIC13.8□□□□□ -0.2
CLDN6P56747 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 AC055811.3-201ENST00000584952 686 ntBASIC13.8□□□□□ -0.2
CLDN6P56747 AC007250.1-201ENST00000608934 338 ntBASIC13.8□□□□□ -0.2
CLDN6P56747 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 AC139712.1-201ENST00000378256 1875 ntBASIC13.8□□□□□ -0.2
CLDN6P56747 AL591122.2-201ENST00000624125 1853 ntBASIC13.8□□□□□ -0.2
CLDN6P56747 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.8□□□□□ -0.2
CLDN6P56747 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CLDN6P56747 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms