Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.65□□□□□ -0.22
WNT3P56703 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.65□□□□□ -0.22
WNT3P56703 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
WNT3P56703 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.65□□□□□ -0.22
WNT3P56703 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
WNT3P56703 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
WNT3P56703 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
WNT3P56703 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
WNT3P56703 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
WNT3P56703 AHCYP2-201ENST00000430630 1300 ntBASIC13.64□□□□□ -0.23
WNT3P56703 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
WNT3P56703 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
WNT3P56703 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.64□□□□□ -0.23
WNT3P56703 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
WNT3P56703 AC097376.2-205ENST00000610159 5334 ntBASIC13.64□□□□□ -0.23
WNT3P56703 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 AC068760.1-201ENST00000493579 1953 ntBASIC13.64□□□□□ -0.23
WNT3P56703 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.64□□□□□ -0.23
WNT3P56703 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
WNT3P56703 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.64□□□□□ -0.23
WNT3P56703 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.64□□□□□ -0.23
WNT3P56703 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
WNT3P56703 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 AC099548.2-209ENST00000480264 625 ntBASIC13.64□□□□□ -0.23
WNT3P56703 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.64□□□□□ -0.23
WNT3P56703 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.64□□□□□ -0.23
WNT3P56703 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.64□□□□□ -0.23
WNT3P56703 AC009955.4-201ENST00000597192 544 ntBASIC13.64□□□□□ -0.23
WNT3P56703 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.64□□□□□ -0.23
WNT3P56703 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
WNT3P56703 MIR6869-201ENST00000619434 62 ntBASIC13.64□□□□□ -0.23
WNT3P56703 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
WNT3P56703 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
WNT3P56703 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.64□□□□□ -0.23
WNT3P56703 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
WNT3P56703 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.63□□□□□ -0.23
WNT3P56703 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.63□□□□□ -0.23
WNT3P56703 AC244394.1-201ENST00000435000 1665 ntBASIC13.63□□□□□ -0.23
WNT3P56703 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.63□□□□□ -0.23
WNT3P56703 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.63□□□□□ -0.23
WNT3P56703 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.63□□□□□ -0.23
WNT3P56703 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.63□□□□□ -0.23
WNT3P56703 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.63□□□□□ -0.23
WNT3P56703 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.63□□□□□ -0.23
WNT3P56703 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
WNT3P56703 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.63□□□□□ -0.23
WNT3P56703 AC100850.1-201ENST00000506768 649 ntBASIC13.63□□□□□ -0.23
WNT3P56703 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.63□□□□□ -0.23
WNT3P56703 FAM8A2P-201ENST00000528813 1142 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms