Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 AC009078.2-202ENST00000463353 338 ntBASIC11.48□□□□□ -0.57
CDC34P49427 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC34P49427 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
CDC34P49427 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC34P49427 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC34P49427 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC34P49427 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC34P49427 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 AL158212.4-201ENST00000624062 1286 ntBASIC11.48□□□□□ -0.57
CDC34P49427 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 DRD5P1-201ENST00000456605 1438 ntBASIC11.48□□□□□ -0.57
CDC34P49427 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 AC024075.2-201ENST00000598112 1473 ntBASIC11.48□□□□□ -0.57
CDC34P49427 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 POM121L14P-201ENST00000406100 1558 ntBASIC11.48□□□□□ -0.57
CDC34P49427 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC34P49427 DLX4-206ENST00000611342 1662 ntBASIC11.48□□□□□ -0.57
CDC34P49427 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.48□□□□□ -0.57
CDC34P49427 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CDC34P49427 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 MYLK-204ENST00000360304 7738 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.47□□□□□ -0.57
CDC34P49427 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 CD82-202ENST00000342935 967 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
CDC34P49427 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 AL139094.1-201ENST00000405549 1188 ntBASIC11.47□□□□□ -0.57
CDC34P49427 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC34P49427 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC34P49427 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC11.47□□□□□ -0.57
CDC34P49427 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC34P49427 AC026434.2-201ENST00000506094 1078 ntBASIC11.47□□□□□ -0.57
CDC34P49427 AC022616.1-201ENST00000518688 554 ntBASIC11.47□□□□□ -0.57
CDC34P49427 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC34P49427 AC131206.1-201ENST00000538078 1211 ntBASIC11.47□□□□□ -0.57
CDC34P49427 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.47□□□□□ -0.57
CDC34P49427 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.47□□□□□ -0.57
CDC34P49427 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CDC34P49427 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
CDC34P49427 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms