Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 TPM3P8-201ENST00000330554 643 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.31■□□□□ 0.04
CTNNA1P35221 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.31■□□□□ 0.04
CTNNA1P35221 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.31■□□□□ 0.04
CTNNA1P35221 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.31■□□□□ 0.04
CTNNA1P35221 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.31■□□□□ 0.04
CTNNA1P35221 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.31■□□□□ 0.04
CTNNA1P35221 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.31■□□□□ 0.04
CTNNA1P35221 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.31■□□□□ 0.04
CTNNA1P35221 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CTNNA1P35221 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.31■□□□□ 0.04
CTNNA1P35221 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.31■□□□□ 0.04
CTNNA1P35221 AC025279.2-201ENST00000569730 653 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 ECM1P1-201ENST00000604092 1279 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 AC104506.1-201ENST00000609247 429 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.31■□□□□ 0.04
CTNNA1P35221 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 AC132938.4-201ENST00000623835 848 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.31■□□□□ 0.04
CTNNA1P35221 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.31■□□□□ 0.04
CTNNA1P35221 AC009093.10-201ENST00000641956 1442 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CTNNA1P35221 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CTNNA1P35221 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTNNA1P35221 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTNNA1P35221 AC004241.5-201ENST00000623870 2448 ntBASIC15.31■□□□□ 0.04
CTNNA1P35221 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.31■□□□□ 0.04
CTNNA1P35221 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTNNA1P35221 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AC114271.1-201ENST00000612689 2813 ntBASIC15.3■□□□□ 0.04
CTNNA1P35221 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CTNNA1P35221 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.3■□□□□ 0.04
CTNNA1P35221 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.3■□□□□ 0.04
CTNNA1P35221 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AC068760.1-201ENST00000493579 1953 ntBASIC15.3■□□□□ 0.04
CTNNA1P35221 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 AP001889.1-201ENST00000525414 633 ntBASIC15.3■□□□□ 0.04
CTNNA1P35221 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AL022313.4-201ENST00000562756 2046 ntBASIC15.3■□□□□ 0.04
CTNNA1P35221 AC005586.2-201ENST00000563946 837 ntBASIC15.3■□□□□ 0.04
CTNNA1P35221 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.3■□□□□ 0.04
CTNNA1P35221 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.3■□□□□ 0.04
CTNNA1P35221 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CTNNA1P35221 AC083964.2-201ENST00000623988 2396 ntBASIC15.3■□□□□ 0.04
CTNNA1P35221 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTNNA1P35221 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC15.3■□□□□ 0.04
CTNNA1P35221 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms